AlViGen, coordinated by InnovPlantProtect, was one of the innovative pilot projects recently selected and funded under the 4th edition of the Promove Program.
The project “AlViGen: Creation of a hub in ALentejo for the GENomic VIgilance of diseases in agriculture”, led by InnovPlantProtect (InPP) in partnership with the University of Évora (WOW), is one of the winners of the 4th edition of the Promove Program (in the category of innovative pilot projects), financed by the La Caixa Foundation, BPI and the Foundation for Science and Technology (FCT). This project will enable the InPP to create the capacity for early detection of multiple crop diseases, using molecular methods that make it possible to identify important characteristics of pathogens, such as virulence, susceptible varieties and resistance to phytopharmaceuticals, benefiting producers and government authorities.
AlViGen aims to create the first genomic surveillance center in the Alentejo, applied to important agricultural crop diseases, a unique structure at local and national level, with state-of-the-art equipment. Genomic surveillance, a methodology widely applied to the SARS-CoV2 virus (which causes COVID-19), makes it possible to characterize pathogens in detail down to the strain level, enabling the agricultural sector to obtain better information on crop pests and diseases, and to manage the means of control (e.g. pesticides) based on data, in order to reduce possible economic, social and environmental impacts.
Ricardo Ramiro, The InPP researcher responsible for the project explains that “the AlViGen project is important to us so that we can establish the conditions for applying genomic surveillance. Once these conditions are established, we will apply genomic surveillance to fungi in olive groves and wheat fields. We will identify which species of fungi are circulating in the air and also characterize the strains of two key fungi in these crops: Puccinia striiformis f.sp. tritici(yellow rust on wheat) and Colletotrichum spp. (olive galls). This will allow early and rapid detection of strains of these fungi and some of their characteristics, including virulence and resistance to fungicides or pesticides.”.
“The information obtained could be used to prevent sharp losses in the production of these essential crops for the Alentejo region, which is the main producer at national level,” adds Rosário Félix, a UÉ professor also involved in the project.
In addition to bringing benefits to producers in crop management, the service provided by the AlViGen hub will also be of great interest to government entities or non-governmental organizations focused on protecting agricultural crops or biodiversity, since the genomic information produced makes it possible to identify pathways and routes of pest transmission, allowing authorities to implement policies that minimize the risks of transmission.
The AlViGen project is the result of an international collaboration with institutions in Portugal, Spain and the United Kingdom, bringing together research centers, companies, producer associations and public administration institutions. In addition to InPP and UÉ, the project includes the British research center John Innes Center, the National Institute for Agricultural and Veterinary Research (INIAV), Spanish companies De Prado and Roma/Roma-Bio, the Agrupamento de Produtores de Cereais do Sul (CERSUL) and the General Directorate of Food and Veterinary (DGAV).
The fourth edition of the Promove 2022 competition received 29 proposals divided into three categories, with funding of over 3.6 million euros awarded to just 13 pilot projects across the Iberian Peninsula. The Promove Program aims to support innovative initiatives in strategic areas to boost the sustainable development of Portugal's inland and border regions and which can be replicated in other regions with similar characteristics.
Find out more about this competition at la Caixa“ website”.

